Software developed by the lab
SPectroscopy ANalysis Tools (spant)
The R spant packages provides a full suite of tools to build automated analysis pipelines for Magnetic Resonance Spectroscopy (MRS) data.
TARQUIN
Popular MRS analysis package developed by Martin Wilson and Greg Reynolds.
fmriqa
The fmriqa R package provides an implementation of the fMRI quality assurance (QA) analysis protocol detailed by Friedman and Glover (2006) doi:10.1002/jmri.20583.
Code and Data for Lab Publications
SLIPMAT paper
Vella O, Bagshaw AP, Wilson M. SLIPMAT: A pipeline for extracting tissue-specific spectral profiles from 1H MR spectroscopic imaging data. Neuroimage. 2023 Aug 15;277:120235. doi: 10.1016/j.neuroimage.2023.120235.